Assessment of airborne fungi in the emergency and traumatology departments of University Hospital Centre, Sidi Bel-Abbes, Algeria

Author(s): Derouicha Matmour [1], Samia Merad [2], Yassine Merad [1], Achwak Bendouida [2], Zoubir Belmokhtar [3], Zakaria Merad [3], Mohamed Amine Boumelik [3], Benali Beghdadli, Othmane Ghomari [3]

Author Affiliation: 

  1. Central Laboratory, University Hospital Centre of Sidi Bel-Abbes, Algeria. 
  2. Medicine Department, Faculty of Medicine, Djillali Liabès University of Sidi Bel-Abbes, Algeria. 
  3. Department of Environmental Sciences, Djillali Liabès University of Sidi Bel-Abbes, Algeria. 

Correspondence: Derouicha Matmour [email protected]

Submitted: March 2026 Accepted: May 2026 Published: August 2026

Citation: Matmour et al. Assessment of airborne fungi in the emergency and traumatology departments of University Hospital Centre, Sidi Bel-Abbes, Algeria.  South Sudan Medical Journal, 2026;19(3):149-156 © 2026 The Author (s) License: This is an open access article under CC BY-NC  DOI: https://dx.doi.org/10.4314/ssmj.v19i3.2 

Abstract

Introduction: Airborne fungi in hospital environments represent a significant risk, particularly in wards housing immunocompromised patients, where they may contribute to nosocomial infections, including hospital-acquired mold diseases. This study aimed to assess the presence of airborne fungi in operating theatres, waiting areas, and corridors within the emergency and traumatology departments of the University Hospital Centre in Sidi Bel-Abbes, Algeria, and to examine environmental and human-related determinants.

Method: Seventy-four samples were collected using passive air sampling. Temperature, relative humidity, and occupant density were recorded. Fungi were identified by macroscopic and microscopic characteristics.

Results: Operating theatres showed the lowest contamination 18 (28.10%), whereas corridors and waiting rooms each accounted for 23 (35.9%). Occupant density was significantly associated with fungal levels (p = 0.05). Aspergillus and Penicillium predominated.

Conclusion: The findings indicate that the operating theatres, waiting rooms, and corridors of the emergency and traumatology departments exhibited relatively low levels of fungal contamination. Airborne fungal concentrations, expressed as Colony Forming Units (CFU)/m³ based on agar plate exposure, were within limits; a few specific high-risk samples (12%) in operating theatres exceeded the threshold. 

Keywords: indoor air quality; airborne fungi; fungal assessment; operating theatres.

Introduction

The World Health Organization (WHO) identifies air pollution as the world’s largest single environmental health risk.[1] The presence of airborne fungi in hospital air was first demonstrated by Noble and Clayton in 1963,[2] and later in a study by Lidwell and Nobe in 1975.[3] This raises significant concerns, particularly in wards with immunocompromised patients, as a source of nosocomial infections or Hospital-Acquired Mold Infections (HAMI), which represent a major challenge and concern for hospitals, especially with the high costs they generate and the consequences for public health.[3]

The operating theatre environment plays an important role in the causation of post-operative wound infections or surgical site infections (SSI), constituting a third of all nosocomial infections and 20% of all hospital-acquired infections. Several studies have shown that 80 to 90 % of contaminants found in the wound after surgery emanate from the air.[4,5]

The objective of this study was to provide data on fungal concentrations in the indoor air of operating theatres, waiting rooms, and corridors within the traumatology and emergency departments of the University Hospital Centre of Sidi Bel-Abbès, Algeria.

Method

This case study was conducted over a 13-week period, from 1 September to 31 December 2023. The assessment was undertaken at the University Hospital Centre of Sidi Bel-Abbes, Algeria. Two departments were selected: emergency and traumatology

They were selected on the grounds that endo-orthopaedic procedures—i.e., those involving the implantation of prosthetic or artificial components—present a heightened susceptibility to contamination by airborne microorganisms. In addition, the emergency department hosts a diverse array of surgical procedures, each associated with distinct risk profiles and varying levels of sensitivity to microbial contamination.

Sampling was carried out in the following locations: waiting rooms, corridors, and operating theatres. The operating theatre within the emergency department was selected at random. The passive air sampling method was selected due to its practicality, as it utilizes readily available resources. This technique relies on the natural settling of airborne particles by gravity onto the surface of a culture medium. Petri dishes containing 4% Sabouraud dextrose agar supplemented with chloramphenicol were exposed, face upwards, to the ambient air for 15 to 20 minutes, and positioned on the floor at the centre of each sampling location.

Sabouraud dextrose agar is suitable for isolating airborne fungi due to its acidic pH and high dextrose content, which favour fungal growth while inhibiting many bacteria. The addition of chloramphenicol further suppresses bacterial contamination, preventing overgrowth on the culture medium. Together, they ensure selective, reliable detection and enumeration of fungal populations in air samples.

An observational checklist was completed concurrently during each sampling session to record indoor air temperature, relative humidity, the number of occupants present, and the presence or absence of a source of outdoor air.

After sampling, Petri dishes were promptly transported to the laboratory and incubated at 24 °C in an inverted position to prevent condensation, a condition suitable for the growth of most fungal species. The cultures were maintained for 7–10 days with daily observations.

The grown colonies were identified depending on morphological properties (shape, size, colour, elevation and edge shape), as well as microscopic examination (40X) to identify their proliferative parts, conidia shape, size, situation and mycelium segmentation (Figure 1).

Figure 1. Different types of samples collected on SDA media.

Fungal isolates were subjected to microscopic examination using Lactophenol Cotton Blue (LPCB) staining following tape preparation/tease mount techniques. Identification was based on both macroscopic and microscopic characteristics, including colony texture and pigmentation, as well as the morphology of conidiophores, vesicles, phialides, and conidial arrangements observed under light microscopy.

Specifically, Aspergillus species were differentiated according to standard mycological criteria:

Aspergillus niger was identified by the presence of large globose vesicles with biseriate phialides and black radiate conidial heads. 

Aspergillus flavus was characterized by rough conidiophores, predominantly uniseriate/biseriate phialides covering the vesicle, and yellow-green conidial heads. »

Following enumeration, airborne fungal concentrations were expressed as CFU/m³ using Omeliansky’s equation.[6]

N: microbial (CFU/m3) of indoor air. 

a: number of colonies per Petri dish.

b: dish surface (cm2).

t: exposure time (minutes).

CFU/m³ (Colony-Forming Units per cubic meter) is a standard unit used to quantify the concentration of viable microorganisms in air. It represents the number of microbial colonies that can grow on a culture medium from a defined volume (1 m³) of air, providing an estimate of airborne microbial load.

To minimize misidentification, presumptive Candida isolates were further examined microscopically after Gram staining. The isolates showed oval to budding yeast cells consistent with Candida morphology. In addition, colony texture and creamy appearance on Sabouraud agar were considered during preliminary identification. No chromogenic media or germ tube testing was performed in the present study, and this limitation has been acknowledged in the revised manuscript.

Results

Characteristics of fungal contamination in operating theatres

Table 1 summarizes the characteristics of fungal contamination in operating theatres. The highest proportion of contamination, 10 (55.60%), was observed in the emergency operating theatre. Operating theatres with relative humidity below 60% exhibited the highest contamination rate at 16 (88.90%).

Table 1. The characteristics of fungal contamination in operating theatres.

Characteristic 

Proportion of contamination  n (%)

Operating room

Emergency

10 (55.6)

Traumatology

08 (44.4)

 

Environmental conditions

Temp < 26 °C

10 (56.0)

Temp > 26 °C

08 (44.0)

RH < 60 %

16 (88.9)

RH > 60 %

02 (11.1)

Surgeries

During surgery

11 (61.0)

Out of surgery

07 (39.0)

Number of individuals during sampling

≤ 5

12 (66.7)

≥ 5

06 (33.3)

Type of surgery

Orthopaedic

06 (33.3)

Digestive

05 (27.8)

None

07(38.9)

Mold presence

Presence

17 (94.4)

Absence

01 (05.6)

Yeast presence

Presence

01 (05.6)

Absence

17 (94.4)

Microbial contamination

Mono-microbial 

15 (83.3)

Multimicrobial

03 (16.7)

Isolated genera

           

           

Candida 

01 (05.6)

Alternaria

01 (05.6)

Cladosporium

01 (05.6)

Penicillium

02 (11.1)

Aspergillus 

13 (72.1)

CFU/m3 in operating rooms

< 180 CFU/m3

37 (88.0)

>180 CFU/m3

05 (12.0)

During surgical procedures, contamination was recorded in 11 (61%), representing the highest rate. The highest contamination rate was also observed in operating theatres with fewer than five occupants, at 12 (66.70%). Among contaminated samples in operating theatres, 17 (94.40%) contained mould.

Samples exhibiting single-species contamination (Mono-microbial) were predominant, accounting for 15 (83.30%). Aspergillus was the most frequently isolated genus, present in 13 (72.10%). Notably, 5 samples (12%) in operating theatres exceeded 180 CFU/m³, indicating significant contamination.

Analytical section 

Table 2 summarizes the analytical findings of the study.

Regarding sampling locations, the correlation between contamination and the department type (emergency versus traumatology) was not statistically significant (p = 0.854). In contrast, a significant correlation was observed between contamination and operating theatres (p = 0.009).

Table 2. The analytical section of the study

Characteristic 

Contamination      (-)

Contamination (+)

Prevalence               n (%)

P-value  

Sampling locations

Emergency

05

34

39 (87.2)

 

0.854

Traumatology

05

30

35 (85.7)

Total

10

64

74 (86.5)

Operating rooms

Outside

03

46

49 (93.9)

0.009

Inside

07

18

25 (72.0)

Total

10

64

74 (86.5)

Waiting rooms





Outside

08

41

49 (83.7)

0.322

Inside

02

23

25 (92.0)

Total

10

64

74 (86.5)

Corridors

Outside

09

41

50 (82.0)

0.103

Inside

01

23

24 (95.8)

Total

10

64

74 (86.5)

Ventilation conditions

Not ventilated

10

43

53 (81.1)

0.322

Ventilated

00

21

21 (100.0)

Total

10

64

74 (86.5)

Air temperature

< 26 °C

06

36

42 (85.7)

0.865

> 26 °C

04

27

31 (87.1)

Total

10

63

73 (86.3)

Air humidity level

< 60 %

10

60

70 (85.7)

0.416

> 60 %

00

04

04 (100.0)

Total

10

64

74 (86.5)

Number of individuals during sampling

≤ 5

07

24

31 (77.4)

0.05

≥ 5

03

40

43 (93.0)

Total

10

64

74 (86.5)

Surgeries

Absence

03

07

10 (70.0)

0.101

Presence 

07

57

64 (89.1)

Total

10

64

74 (86.5)

CFU/m3

<1000

07

38

45 (84.4)

0.206

>1000

00

05

05 (100.0)

Total

07

43

50 (86.0)

Mold contamination

Absence

10

02

12 (16.7)

0.0001

Presence

00

62

62 (100.0

Total

10

64

74 (86.5)

Yeast contamination

Absence

10

61

71 (85.9)

0.485

Presence

00

03

03 (100.0)

Total

10

64

74 (86.5)

Multi-microbial contamination

Mono-microbial

10

33

43 (76.7)

0.004

Multi-microbial

00

31

31 (100.0)

Total

10

64

74 (86.5)

Concerning environmental conditions, no significant correlation was found between contamination and natural ventilation, temperature, or relative humidity (RH), with p-values of 0.322, 0.865, and 0.416, respectively.

However, significant correlations were identified between contamination and the number of occupants during sampling, the presence of mould, and the occurrence of multi- microbial contamination, with p-values of 0.05, 0.0001, and 0.004, respectively.

Discussion

The emergency department showed a slightly higher, though not statistically significant, contamination prevalence (39 [87.2%] vs 35 [85.7%] in traumatology; p = 0.854) (Table 2). Within operating theatres, contamination was greater in the emergency theatre (10 [55.6%] vs 8 [44.4%]) (Table 1), likely reflecting higher patient turnover and the variety of acute and contagious cases managed. 

The incubation temperature of 24°C was selected because it is commonly recommended for the cultivation and enumeration of environmental airborne fungi, particularly filamentous molds, in indoor air quality studies. This temperature favours the growth and sporulation of a broad spectrum of environmental fungal species while limiting excessive bacterial proliferation. In addition, several previous studies investigating fungal air contamination in hospital environments have used incubation temperatures close to 25°C for environmental monitoring purposes.

Contamination prevalence was significantly higher outside operating theatres (49 [93.9%]; p = 0.009) (Table 2), while operating theatres showed the lowest levels, likely due to restricted access, strict hygiene protocols, and controlled locations. These results align with findings from Nigerian teaching hospitals, where operating theatres also exhibited the lowest fungal concentrations (10–15 CFU/m³).[7]

Contamination was more prevalent in areas outside waiting rooms, affecting 41 (64.1%) of samples. Within waiting rooms, a higher, though not statistically significant, prevalence was observed (92% vs 83.7% outside; p = 0.322), consistent with findings from the Nigerian study.[7] 

The prevalence of contamination was higher inside corridors, with 24 (95.80%), compared to 50 (82%) outside corridors; however, this difference was not statistically significant (p = 0.103) (Table 2). 

No significant association was observed between contamination and the presence of natural ventilation (Table 2). Nevertheless, ventilation—natural or mechanical—can influence indoor fungal levels by diluting, removing, and replacing air, as supported by previous studies.[4,7]

In operating theatres, contamination was 10 (56%) at temperatures below 26 °C (Table 1), with a slight, non-significant increase in warmer areas (p = 0.865) (Table 2), indicating no clear temperature effect. While an Iranian study observed a similar non-significant rise in fungal growth at higher temperatures,[8] other research has reported a strong correlation between indoor fungal load and ambient temperature.[9]

Contamination in samples collected at ambient humidity below 60 % was 60 (93.8%), with 42 (85.7%) in operating rooms. This difference was not statistically significant (p = 0.416), consistent with a Portuguese maternity unit study,[10] although other research, such as in Southern Thailand hospital wards, reported a significant correlation between relative humidity and fungal contamination.[11]

Overall contamination at relative humidity below 60 % was 60 (93.8%) (Table 2), with 16 (88.9%) in operating theatres (Table 1). This difference was not statistically significant (p = 0.416), aligning with a Portuguese maternity unit study,[10] although other research, such as in Southern Thailand,[11] has reported a significant correlation between humidity and hospital fungal contamination.

In operating theatres, contamination increased with more than five individuals present during sampling, reaching 12 (66.7%) (Table 1). Overall, areas with over five occupants showed higher contamination (43 [93%] vs 31 [77.4%] (Table 2) in areas with five or fewer), with a significant correlation between fungal levels and occupant density (p = 0.05), consistent with previous findings from a Saudi Arabian university hospital.[12]

Contamination prevalence was higher in active operating theatres (64 [89.1%]) (Table 2) compared with idle theatres (10 [70%]), possibly reflecting the impact of staff activity and patient-related exposure. However, this difference was not statistically significant (p = 0.101), in contrast to findings reported in other studies.[13]

Mould was detected in 97% of positive samples, while yeasts were found in 5%, with 48% showing mixed growth; in operating theatres, mould predominated (94%), and contamination was strongly associated with mould (p = 0.0001) but not with yeasts (p = 0.485), likely reflecting the limited sensitivity of passive air sampling for yeasts (Table 2).

A significant correlation was observed between multi-species contamination and overall contamination (p = 0.004), with higher microbial loads in such environments, suggesting that these settings may favour microbial proliferation and reflect potential shortcomings in hygiene practices.

Aspergillus spp. was the most frequently detected genus 56 (33.7%), followed by Aspergillus flavus 47 (28.3%), Penicillium spp. 21 (12.7%), and Aspergillus niger 14 (8.4%). In operating theatres, Aspergillus spp. predominated 13 (72.2%), followed by Penicillium spp. 2 (11.1%), while Cladosporium, Alternaria, and Candida were each detected in a single case (5.6%).

Although direct comparisons are limited by methodological and environmental differences, numerous studies consistently report these genera as the most prevalent airborne fungi in hospital indoor environments.[14]

Across multiple studies, the most frequently reported genera were Aspergillus spp. (24 studies), Penicillium spp. (23 studies), Cladosporium spp. (17 studies), and Fusarium spp. (10 studies), while Candida spp. was the most common unicellular fungus. Within Aspergillus, the most prevalent sections were Niger (18 of 24 studies), followed by Fumigatus (14 of 24) and Flavus (9 of 24).[15]

A study conducted across five educational hospital wards in Iran reported that the highest fungal populations were Penicillium spp. (32.06%), Cladosporium spp. (20.5%), Aspergillus fumigatus (14.61%), and A. niger.[13]

Similarly, a study carried out in the Paediatric Unit of Edirne Government Hospital in Turkey found that the most frequent genus was Cladosporium, with 462 colonies (33.58%), followed by Alternaria with 310 colonies (22.53%) and Penicillium with 280 colonies (20.35%).[16]

A higher, though not statistically significant, prevalence was observed in samples with CFU/m³ exceeding 1000 5 (100%) compared with those below this threshold (p = 0.206) (Table 2), consistent with the World Health Organization’s recommended limits.

In operating theatres, 37 (88%) of CFU/m³ values were below 180 (Table 1), corresponding to levels associated with a lower risk of postoperative wound infections.[5]

Although passive air sampling is practical and inexpensive for routine environmental surveillance, it is less sensitive and less quantitative than active volumetric sampling methods.

Future investigations should incorporate molecular identification methods, such as PCR and sequencing, to improve the accuracy of fungal identification at the species level. The inclusion of antifungal susceptibility testing would also be highly relevant, particularly for the detection of emerging antifungal-resistant strains, including azole-resistant Aspergillus spp., which represent an increasing concern in hospital-associated infections and infection control programs.

Conclusion

Most fungal isolates were detected at levels below 180 CFU/m³ in operating theatres and below 1000 CFU/m³ in waiting rooms and corridors, remaining within internationally accepted limits and indicating effective infection control measures. However, the presence of Aspergillus underscores the need for improved cleaning and disinfection practices.

Overcrowding should be minimized, as occupant density is positively associated with airborne fungal levels; restricting visitors may therefore help reduce indoor microbial load in hospital settings.

Future studies should incorporate molecular identification techniques and antifungal susceptibility testing to better characterize airborne fungal species and detect emerging resistant strains, particularly azole-resistant Aspergillus spp. of clinical importance in hospital environments.

Conflict of interest: None

Sources of funding: This study was supported by the Sidi Bel-Abbes University Hospital Centre.

Authors’ contributions: DM and SM contributed to study conceptualization, methodology, data interpretation, and drafting of the original manuscript. ZB and AB contributed to the methodology. YM, MAB, and OG conducted sampling and contributed to data interpretation.

Ethics approval and consent to participate:

The study protocol was approved by the Ethics Committee of the Sidi Bel-Abbes University Hospital Centre (Ref: Opinion No. 34, 17 June 2023). Informed consent was obtained from all participants.

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